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  5. Cre04.g213450

Cre04.g213450 (30791227, VPS2A)


Aliases : 30791227, VPS2A

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS2/CHMP2 component


Gene families : OG_01_0000736 (OrthoFinder) Phylogenetic Tree(s): OG0000736_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre04.g213450
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020510.41 tig00020510_g9823.t1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.05 OrthoFinder
Cpa|evm.model.tig00020830.6 tig00020830_g14387.t1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder
EOD26134 No alias Vacuolar protein sorting protein 2A [Ensembl]. 0.02 OrthoFinder
OT_12G01970.1 No alias Snf7 family [Interproscan]. 0.02 OrthoFinder
PTI_19G00980.1 No alias Snf7 family [Interproscan]. 0.05 OrthoFinder
PTI_21G00840.1 No alias Snf7 family [Interproscan]. 0.07 OrthoFinder
Sro1334_g263820.1 Contig785.g8786 Charged multivesicular body protein 0.03 OrthoFinder
Sro900_g217890.1 Contig2813.g22567 Body protein 2a 0.01 OrthoFinder
XM_002505408.1 MICPUN_95710, 95710 Snf7 family [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498509.1_7462 KAA8498509 Charged multivesicular body protein 2b 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497264.1_993 KAA8497264 Charged multivesicular body protein 2a-like 2 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
InterPro domains Description Start Stop
IPR005024 Snf7_fam 4 171
No external refs found!