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  5. Cre03.g204350

Cre03.g204350 (30787499, CLPR4)


Aliases : 30787499, CLPR4

Description : Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g204350
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000411.30 tig00000411_g533.t1 ATP-dependent Clp protease proteolytic subunit 6,... 0.02 OrthoFinder
Cpa|evm.model.tig00000842.6 tig00000842_g4825.t1 ATP-dependent Clp protease proteolytic subunit... 0.02 OrthoFinder
Cz01g02300.t1 No alias Clp protease proteolytic subunit... 0.06 OrthoFinder
Cz02g22090.t1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
Cz12g19130.t1 No alias Clp protease proteolytic subunit... 0.05 OrthoFinder
Cz19g05120.t1 No alias Clp protease proteolytic subunit... 0.05 OrthoFinder
Dusal.0070s00013.1 33189316 Clp protease proteolytic subunit... 0.02 OrthoFinder
OT_02G00390.1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
OT_02G01220.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
OT_02G02070.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
OT_05G01890.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
Vocar.0001s0268.1 32885797 Clp protease proteolytic subunit... 0.02 OrthoFinder
Vocar.0011s0141.1 32895480 Clp protease proteolytic subunit... 0.03 OrthoFinder
Vocar.0016s0150.1 32898204 Clp protease proteolytic subunit... 0.04 OrthoFinder
Vocar.0018s0103.1 32898503 Clp protease proteolytic subunit... 0.03 OrthoFinder
Vocar.0034s0071.1 32893064 Clp protease proteolytic subunit... 0.02 OrthoFinder
XM_003054761.1 MicpuC2_12936, 12936 Clp protease proteolytic subunit... 0.02 OrthoFinder
lcl|BLLF01000415.1_cds_GFH11568.1_6045 HaLaN_07087, GFH11568 ATP-dependent Clp protease proteolytic subunit 0.02 OrthoFinder
lcl|BLLF01000493.1_cds_GFH12345.1_6822 HaLaN_08009, GFH12345 ATP-dependent Clp protease proteolytic subunit 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019107 myristoyltransferase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 44 227
No external refs found!