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  5. Cre03.g203450

Cre03.g203450 (30787782, RPS21)


Aliases : 30787782, RPS21

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS21 component


Gene families : OG_01_0003705 (OrthoFinder) Phylogenetic Tree(s): OG0003705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g203450
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020780.14 tig00020780_g13766.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder
Dusal.0001s00040.1 33198798 Ribosomal protein S21e [Interproscan]. 0.22 OrthoFinder
EOD12033 No alias Ribosomal protein S21e [Interproscan]. 0.16 OrthoFinder
OT_16G01860.1 No alias Ribosomal protein S21e [Interproscan]. 0.18 OrthoFinder
PTI_25G00250.1 No alias Ribosomal protein S21e [Interproscan]. 0.4 OrthoFinder
Sro6_g004850.1 Contig175.g1990 40S ribosomal protein S21 0.38 OrthoFinder
SymbC1.scaffold2995.5 2995.5 Ribosomal protein S21e [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold4516.5 4516.5 Ribosomal protein S21e [Interproscan]. 0.03 OrthoFinder
TP04G05880.1 No alias Ribosomal protein S21e [Interproscan]. 0.28 OrthoFinder
Vocar.0011s0134.1 32895267 Ribosomal protein S21e [Interproscan]. 0.14 OrthoFinder
XM_002506478.1 MICPUN_109558, 109558 Ribosomal protein S21e [Interproscan]. 0.27 OrthoFinder
XM_003063433.1 MicpuC2_45937, 45937 Ribosomal protein S21e [Interproscan]. 0.12 OrthoFinder
lcl|BLLF01004584.1_cds_GFH29895.1_24372 HaLaN_28641, GFH29895 40S ribosomal protein S21 0.04 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60607.1_4698 PRW60607 40S ribosomal S21-2 0.27 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498324.1_7277 KAA8498324 40S ribosomal protein S21 0.25 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 1 77
No external refs found!