Cre03.g198850 (30788164)

Aliases : 30788164

Description : Thylakoid lumenal 19 kDa protein, chloroplastic OS=Arabidopsis thaliana

Gene families : OG_01_0004419 (OrthoFinder) Phylogenetic Tree(s): OG0004419_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre03.g198850
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
Cz01g04040.t1	No alias	PsbP, C-terminal [Interproscan].	0.05	OrthoFinder
Dusal.0489s00003.1	33192695	Hypothetical protein	0.06	OrthoFinder
OT_01G03190.1	No alias	PsbP, C-terminal [Interproscan].	0.06	OrthoFinder
Vocar.0011s0200.1	32895302	PsbP, C-terminal [Interproscan].	0.03	OrthoFinder
XM_002505511.1	MICPUN_63715, 63715	Hypothetical protein	0.06	OrthoFinder
XM_002508148.1	MICPUN_84449, 84449	Hypothetical protein	0.07	OrthoFinder
XM_003063624.1	MicpuC2_53553, 53553	Hypothetical protein	0.04	OrthoFinder
lcl\|BLLF01004672.1_cds_GFH30040.1_24517	HaLaN_28814, GFH30040	PsbP domain-containing protein	0.02	OrthoFinder
lcl\|LHPG02000002.1_cds_PRW60466.1_4444	PRW60466	Thylakoid lumenal 19 kDa chloroplastic	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Enrichment
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0005506	iron ion binding	IEP	Enrichment
CC	GO:0005741	mitochondrial outer membrane	IEP	Enrichment
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Enrichment
MF	GO:0008234	cysteine-type peptidase activity	IEP	Enrichment
CC	GO:0009522	photosystem I	IEP	Enrichment
CC	GO:0009538	photosystem I reaction center	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Enrichment
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Enrichment
MF	GO:0016859	cis-trans isomerase activity	IEP	Enrichment
CC	GO:0019867	outer membrane	IEP	Enrichment
MF	GO:0020037	heme binding	IEP	Enrichment
CC	GO:0031090	organelle membrane	IEP	Enrichment
CC	GO:0031966	mitochondrial membrane	IEP	Enrichment
CC	GO:0031968	organelle outer membrane	IEP	Enrichment
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Enrichment
MF	GO:0046906	tetrapyrrole binding	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
CC	GO:0098588	bounding membrane of organelle	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002683	PsbP_C	100	246

External Links

No external refs found!