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  5. Cre03.g197700

Cre03.g197700 (30788134)


Aliases : 30788134

Description : Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000051 (OrthoFinder) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g197700
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001073.18 tig00001073_g6826.t1 Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder
Cpa|evm.model.tig00020710.90 tig00020710_g13355.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020710.92 tig00020710_g13356.t1 No description available 0.04 OrthoFinder
Cz02g21310.t1 No alias PWWP domain; PHD-finger; FY-rich, N-terminal; FY-rich,... 0.1 OrthoFinder
Cz07g29070.t1 No alias AWS domain; SET domain; Zinc finger, GATA-type [Interproscan]. 0.05 OrthoFinder
Cz14g21060.t1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
Dusal.0025s00024.1 33200721 FY-rich, C-terminal; Zinc finger, PHD-finger; FY-rich,... 0.02 OrthoFinder
EOD12158 No alias FY-rich, C-terminal; SET domain [Interproscan]. 0.02 OrthoFinder
OT_13G03070.1 No alias AWS domain; SET domain [Interproscan]. 0.05 OrthoFinder
PTI_01G11780.1 No alias SET domain; AWS domain [Interproscan]. 0.03 OrthoFinder
PTI_12G04100.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
PTI_29G00470.1 No alias Protein kinase domain; SET domain; Cyclin, N-terminal... 0.02 OrthoFinder
Sro72_g039840.1 Contig1459.g13383 36 and H4 lysine-20 specific 0.02 OrthoFinder
Vocar.0003s0350.1 32889020 SET domain [Interproscan]. 0.02 OrthoFinder
Vocar.0011s0318.1 32895428 FY-rich, C-terminal; PHD-zinc-finger like domain; PWWP... 0.02 OrthoFinder
XM_002502643.1 MICPUN_58938, 58938 Set domain protein 0.05 OrthoFinder
XM_002502882.1 MICPUN_83006, 83006 Set domain protein 0.07 OrthoFinder
XM_003062387.1 MicpuC2_68746, 68746 Hypothetical protein 0.03 OrthoFinder
XM_003062388.1 MicpuC2_21435, 21435 Set domain protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 1741 1853
IPR003889 FYrich_C 1075 1143
IPR003888 FYrich_N 1019 1068
IPR000313 PWWP_dom 841 893
No external refs found!