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  5. Cre03.g192000

Cre03.g192000 (30787763, SEC13L)


Aliases : 30787763, SEC13L

No description available


Gene families : OG_01_0000807 (OrthoFinder) Phylogenetic Tree(s): OG0000807_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g192000
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cz03g29060.t1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Dusal.0081s00032.1 33198240 WD40 repeat [Interproscan]. 0.02 OrthoFinder
Dusal.0371s00014.1 33186924 Hypothetical protein 0.02 OrthoFinder
PTI_05G01310.1 No alias WD40 repeat [Interproscan]. 0.01 OrthoFinder
Sro702_g189930.1 Contig1416.g12996 Transport protein SEC13 0.02 OrthoFinder
Sro909_g218970.1 Contig366.g4939 Nucleoporin SEH1 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0019781 NEDD8 activating enzyme activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!