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  5. Cre03.g189000

Cre03.g189000 (30787481)


Aliases : 30787481

Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.Rad54 chromatin remodeling factor


Gene families : OG_01_0000285 (OrthoFinder) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g189000
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000605.2 tig00000605_g2468.t1 DNA repair and recombination protein RAD54 OS=Oryza... 0.03 OrthoFinder
Cpa|evm.model.tig00020614.39 tig00020614_g12152.t1 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder
Cz01g10190.t1 No alias SNF2-related, N-terminal domain [Interproscan]. 0.02 OrthoFinder
Cz01g35190.t1 No alias SNF2-related, N-terminal domain [Interproscan]. 0.02 OrthoFinder
Cz01g35200.t1 No alias SNF2-related, N-terminal domain; Helicase, C-terminal... 0.03 OrthoFinder
EOD06519 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.01 OrthoFinder
OT_08G04010.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.03 OrthoFinder
PTI_14G01170.1 No alias Helicase, C-terminal; Bromodomain; SNF2-related,... 0.02 OrthoFinder
Sro368_g128060.1 Contig2761.g22245 ISWI chromatin-remodeling complex ATPase ISW2 0.01 OrthoFinder
TP13G03350.1 No alias SNF2-related, N-terminal domain; Helicase, C-terminal... 0.01 OrthoFinder
Vocar.0035s0038.1 32896789 Helicase, C-terminal; SNF2-related, N-terminal domain... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 695 806
IPR000330 SNF2_N 370 656
No external refs found!