Aliases : 30787941, VPS46
Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS46/CHMP1 associated protein
Gene families : OG_01_0003320 (OrthoFinder) Phylogenetic Tree(s): OG0003320_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre03.g188500 | |
Cluster | HCCA: Cluster_148 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00020554.72 | tig00020554_g10852.t1 | Vesicle trafficking.endomembrane trafficking.ESCRT... | 0.07 | OrthoFinder | |
Cz01g16250.t1 | No alias | Snf7 family [Interproscan]. | 0.02 | OrthoFinder | |
EOD40189 | No alias | Vacuolar protein sorting protein 46A [Ensembl]. | 0.02 | OrthoFinder | |
OT_01G05920.1 | No alias | Snf7 family [Interproscan]. | 0.06 | OrthoFinder | |
Sro1644_g288170.1 | Contig3810.g29186 | ESCRT-related protein | 0.01 | OrthoFinder | |
Transcript_contig_59252 | 59252 | Snf7 family [Interproscan]. | 0.03 | OrthoFinder | |
Vocar.0011s0220.1 | 32895408 | Snf7 family [Interproscan]. | 0.02 | OrthoFinder | |
XM_002508689.1 | MICPUN_109016, 109016 | Snf7 family [Interproscan]. | 0.04 | OrthoFinder | |
lcl|VRMN01000008.1_cds_KAA8492750.1_2486 | KAA8492750 | Charged multivesicular body protein 1a | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
CC | GO:0000813 | ESCRT I complex | IEP | Enrichment |
MF | GO:0004601 | peroxidase activity | IEP | Enrichment |
MF | GO:0004602 | glutathione peroxidase activity | IEP | Enrichment |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
BP | GO:0006979 | response to oxidative stress | IEP | Enrichment |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Enrichment |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015693 | magnesium ion transport | IEP | Enrichment |
MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
MF | GO:0016791 | phosphatase activity | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
BP | GO:0030001 | metal ion transport | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
CC | GO:0036452 | ESCRT complex | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005024 | Snf7_fam | 12 | 173 |
No external refs found! |