Cre03.g188500 (30787941, VPS46)


Aliases : 30787941, VPS46

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS46/CHMP1 associated protein


Gene families : OG_01_0003320 (OrthoFinder) Phylogenetic Tree(s): OG0003320_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g188500
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.72 tig00020554_g10852.t1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.07 OrthoFinder
Cz01g16250.t1 No alias Snf7 family [Interproscan]. 0.02 OrthoFinder
EOD40189 No alias Vacuolar protein sorting protein 46A [Ensembl]. 0.02 OrthoFinder
OT_01G05920.1 No alias Snf7 family [Interproscan]. 0.06 OrthoFinder
Sro1644_g288170.1 Contig3810.g29186 ESCRT-related protein 0.01 OrthoFinder
Transcript_contig_59252 59252 Snf7 family [Interproscan]. 0.03 OrthoFinder
Vocar.0011s0220.1 32895408 Snf7 family [Interproscan]. 0.02 OrthoFinder
XM_002508689.1 MICPUN_109016, 109016 Snf7 family [Interproscan]. 0.04 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492750.1_2486 KAA8492750 Charged multivesicular body protein 1a 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR005024 Snf7_fam 12 173
No external refs found!