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  5. Cre03.g182600

Cre03.g182600 (30786753, CPL1)


Aliases : 30786753, CPL1

Description : Chromatin organisation.histone modifications.histone deacetylation.histone deacetylase machineries.HDC1/Rxt3 associated component


Gene families : OG_01_0005244 (OrthoFinder) Phylogenetic Tree(s): OG0005244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g182600
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
EOD34653 No alias Histone deacetylation protein Rxt3 [Interproscan]. 0.02 OrthoFinder
OT_04G04620.1 No alias Histone deacetylation protein Rxt3 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78118 78118 Histone deacetylation protein Rxt3 [Interproscan]. 0.02 OrthoFinder
XM_003059186.1 MicpuC2_58886, 58886 Histone deacetylation protein Rxt3 [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR013951 Rxt3 44 77
No external refs found!