1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre03.g180850

Cre03.g180850 (30786735, SEC23A)


Aliases : 30786735, SEC23A

Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec23 component


Gene families : OG_01_0001655 (OrthoFinder) Phylogenetic Tree(s): OG0001655_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g180850
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001408.15 tig00001408_g8610.t1 Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder
OT_09G02640.1 No alias Sec23/Sec24 beta-sandwich; Gelsolin-like domain;... 0.02 OrthoFinder
PTI_01G03450.1 No alias Gelsolin-like domain; Sec23/Sec24, helical domain;... 0.02 OrthoFinder
Sro972_g226640.1 Contig330.g4393 Transport protein SEC23 0.04 OrthoFinder
Vocar.0015s0302.1 32898848 Sec23/Sec24, trunk domain; Gelsolin-like domain;... 0.13 OrthoFinder
XM_002505940.1 MICPUN_107228, 107228 Sec23/Sec24, helical domain; Sec23/Sec24, trunk domain;... 0.05 OrthoFinder
XM_002508302.1 MICPUN_61002, 61002 Sec23/Sec24, helical domain; Sec23/Sec24, trunk domain;... 0.04 OrthoFinder
XM_003057122.1 MicpuC2_56027, 56027 Gelsolin-like domain; Sec23/Sec24, helical domain;... 0.02 OrthoFinder
lcl|BLLF01000060.1_cds_GFH06870.1_1347 HaLaN_01582, GFH06870 Protein transport protein SEC23 0.02 OrthoFinder
lcl|BLLF01000060.1_cds_GFH06871.1_1348 HaLaN_01583, GFH06871 Protein transport protein SEC23 0.04 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32992.1_3755 PRW32992 Transport SEC23-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
CC GO:0005785 signal recognition particle receptor complex IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR012990 Sec23_24_beta_S 402 506
IPR007123 Gelsolin-like_dom 634 720
IPR006895 Znf_Sec23_Sec24 53 91
IPR006900 Sec23/24_helical_dom 520 617
IPR006896 Sec23/24_trunk_dom 120 389
No external refs found!