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  5. Cre03.g178950

Cre03.g178950 (30787878)


Aliases : 30787878

Description : ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana


Gene families : OG_01_0000107 (OrthoFinder) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g178950
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000789.41 tig00000789_g4134.t1 ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00020961.28 tig00020961_g16648.t1 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz10g20100.t1 No alias ATP-dependent DNA helicase RecQ, zinc-binding domain;... 0.02 OrthoFinder
Cz12g21050.t1 No alias ATP-dependent DNA helicase RecQ, zinc-binding domain;... 0.03 OrthoFinder
OT_03G01700.1 No alias Helicase, C-terminal; RQC domain; ATP-dependent DNA... 0.04 OrthoFinder
OT_04G00490.1 No alias DEAD/DEAH box helicase domain; HRDC domain; Helicase,... 0.02 OrthoFinder
OT_05G04280.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
PTI_16G00860.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
Sro108_g054090.1 Contig2294.g18989 Syndrome ATP-dependent helicase homolog 0.02 OrthoFinder
Sro9_g007280.1 Contig4120.g31496 Probable Werner syndrome ATP-dependent helicase homolog 1 0.03 OrthoFinder
Vocar.0025s0103.1 32898387 RQC domain; DEAD/DEAH box helicase domain; Helicase,... 0.02 OrthoFinder
Vocar.0048s0026.1 32893654 Zinc finger, CCHC-type; DEAD/DEAH box helicase domain... 0.03 OrthoFinder
XM_002502498.1 MICPUN_50295, 50295 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
XM_003056852.1 MicpuC2_636, 636 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.05 OrthoFinder
XM_003062439.1 MicpuC2_29315, 29315 Helicase, C-terminal; ATP-dependent DNA helicase RecQ,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 463 569
IPR011545 DEAD/DEAH_box_helicase_dom 245 417
IPR032284 RecQ_Zn-bd 583 647
No external refs found!