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  5. Cre03.g178600

Cre03.g178600 (30787789, TOP1)


Aliases : 30787789, TOP1

Description : Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase


Gene families : OG_01_0002413 (OrthoFinder) Phylogenetic Tree(s): OG0002413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g178600
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Dusal.0007s00039.1 33201185 DNA topoisomerase I, catalytic core, eukaryotic-type;... 0.02 OrthoFinder
EOD31015 No alias DNA topoisomerase type I [Ensembl]. 0.04 OrthoFinder
Sro1053_g235820.1 Contig4118.g31453 DNA topoisomerase 1 0.02 OrthoFinder
SymbC1.scaffold143.2 143.2 Topoisomerase I C-terminal domain; DNA topoisomerase I,... 0.02 OrthoFinder
Vocar.0015s0343.1 32898937 DNA topoisomerase I, DNA binding, eukaryotic-type; DNA... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019107 myristoyltransferase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR008336 TopoI_DNA-bd_euk 128 339
IPR025834 TopoI_C_dom 608 676
IPR013500 TopoI_cat_euk 343 580
No external refs found!