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Aliases : 30787436
Description : Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase
Gene families : OG_01_0000364 (OrthoFinder) Phylogenetic Tree(s): OG0000364_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre03.g175250 | |
| Cluster | HCCA: Cluster_156 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001107.11 | tig00001107_g7096.t1 | Secondary metabolism.terpenoids.terpenoid... | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00001107.3 | tig00001107_g7091.t1 | Secondary metabolism.terpenoids.mevalonate... | 0.02 | OrthoFinder | |
| PTI_08G02530.1 | No alias | NUDIX hydrolase domain [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_10G00280.1 | No alias | Squalene/phytoene synthase; NUDIX hydrolase domain... | 0.02 | OrthoFinder | |
| Sro2_g001860.1 | Contig467.g6344 | Inactive squalene synthase 2 | 0.01 | OrthoFinder | |
| Vocar.0015s0195.1 | 32898856 | Squalene/phytoene synthase [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8498029.1_6982 | KAA8498029 | Isopentenyl-diphosphate Delta-isomerase I | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Enrichment |
| CC | GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | IEP | Enrichment |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Enrichment |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Enrichment |
| BP | GO:0006464 | cellular protein modification process | IEP | Enrichment |
| BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Enrichment |
| MF | GO:0016757 | glycosyltransferase activity | IEP | Enrichment |
| MF | GO:0016758 | hexosyltransferase activity | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| CC | GO:0031090 | organelle membrane | IEP | Enrichment |
| BP | GO:0036211 | protein modification process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0070085 | glycosylation | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | Enrichment |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Enrichment |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| CC | GO:1990234 | transferase complex | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |