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  5. Cre03.g162701

Cre03.g162701 (30788203)


Aliases : 30788203

Description : Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana


Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g162701
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Dusal.0001s00013.1 33198814 SNF2-related, N-terminal domain; Helicase, C-terminal;... 0.01 OrthoFinder
OT_17G01920.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
Transcript_contig_67487 67487 Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
XM_003058971.1 MicpuC2_58412, 58412 SNF2 super family 0.01 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33099.1_3518 PRW33099 SNF2 family DNA-dependent ATPase 0.03 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18335.1_5824 PRW18335 TATA-binding-associated factor 172 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 1283 1396
IPR000330 SNF2_N 923 1195
No external refs found!