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  5. Cpa|evm.model.tig00000056.26

Cpa|evm.model.tig00000056.26 (tig00000056_g24071.t1)


Aliases : tig00000056_g24071.t1

Description : Myosin-13 OS=Arabidopsis thaliana


Gene families : OG_01_0000062 (OrthoFinder) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000056.26
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
EOD11728 No alias Myosin head, motor domain [Interproscan]. 0.01 OrthoFinder
EOD18854 No alias Myosin head, motor domain [Interproscan]. 0.01 OrthoFinder
EOD24030 No alias Myosin head, motor domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold5446.1 5446.1 Myosin head, motor domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_89192 89192 Myosin head, motor domain; IQ motif, EF-hand binding... 0.01 OrthoFinder
XM_002500195.1 MICPUN_106745, 106745 Dilute domain; IQ motif, EF-hand binding site; Myosin... 0.02 OrthoFinder
XM_003061906.1 MicpuC2_28890, 28890 Dilute domain; Myosin head, motor domain; Myosin,... 0.02 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05838.1_6020 PRW05838 Myosin heavy class XI isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004133 glycogen debranching enzyme activity IEP Enrichment
MF GO:0004134 4-alpha-glucanotransferase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR004009 Myosin_N 12 47
IPR001609 Myosin_head_motor_dom 67 239
IPR001609 Myosin_head_motor_dom 251 662
No external refs found!