- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : 30787241
Description : RNA processing.RNA decay.exosome complex.associated co-factors.SOP1 RNA degradation surveillance factor
Gene families : OG_01_0010852 (OrthoFinder) Phylogenetic Tree(s): OG0010852_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre03.g154900 | |
| Cluster | HCCA: Cluster_129 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000229.4 | tig00000229_g20108.t1 | RNA processing.RNA decay.exosome complex.associated... | 0.02 | OrthoFinder | |
| UNPLg00273.t1 | No alias | Hypothetical protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0003951 | NAD+ kinase activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| MF | GO:0004650 | polygalacturonase activity | IEP | Enrichment |
| MF | GO:0005244 | voltage-gated ion channel activity | IEP | Enrichment |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Enrichment |
| MF | GO:0005253 | anion channel activity | IEP | Enrichment |
| MF | GO:0005254 | chloride channel activity | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006821 | chloride transport | IEP | Enrichment |
| BP | GO:0006887 | exocytosis | IEP | Enrichment |
| MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
| MF | GO:0017025 | TBP-class protein binding | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| BP | GO:0032940 | secretion by cell | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| BP | GO:0046903 | secretion | IEP | Enrichment |
| CC | GO:0099023 | vesicle tethering complex | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | Enrichment |
| BP | GO:0140352 | export from cell | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |