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  5. Cre03.g150300

Cre03.g150300 (30787530)


Aliases : 30787530

Description : Calmodulin-3 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g150300
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020904.77 tig00020904_g15210.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021435.44 tig00021435_g21427.t1 Calmodulin OS=Mougeotia scalaris 0.02 OrthoFinder
Cpa|evm.model.tig00021435.47 tig00021435_g21427.t1 Calmodulin OS=Mougeotia scalaris 0.02 OrthoFinder
Cz14g12250.t1 No alias EF-hand domain pair; EF-hand domain [Interproscan]. 0.03 OrthoFinder
Dusal.1124s00002.1 33189601 EF-hand domain [Interproscan]. 0.02 OrthoFinder
EOD20105 No alias Centrin-like protein [Ensembl]. 0.02 OrthoFinder
PTI_27G00410.1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
Sro321_g116830.1 Contig56.g439 Putative calmodulin-like protein 0.01 OrthoFinder
SymbC1.scaffold1382.9 1382.9 EF-hand domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold64.6 64.6 Hypothetical protein 0.01 OrthoFinder
TP07G01950.1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_59375 59375 EF-hand domain pair; EF-hand domain [Interproscan]. 0.02 OrthoFinder
Vocar.0019s0206.1 32892735 EF-hand domain [Interproscan]. 0.02 OrthoFinder
XM_002505526.1 MICPUN_77142, 77142 EF-hand domain [Interproscan]. 0.02 OrthoFinder
XM_003064454.1 MicpuC2_54225, 54225 EF-hand domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000982.1_cds_GFH16349.1_10826 HaLaN_12747, GFH16349 Centrin 0.02 OrthoFinder
lcl|BLLF01002489.1_cds_GFH24275.1_18752 HaLaN_22038, GFH24275 EF-hand domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32961.1_3745 PRW32961 Calmodulin 0.03 OrthoFinder
lcl|LHPG02000024.1_cds_PRW20359.1_5525 PRW20359 Centrin 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 79 142
IPR002048 EF_hand_dom 10 69
No external refs found!