- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : 30786849
Description : Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana
Gene families : OG_01_0000194 (OrthoFinder) Phylogenetic Tree(s): OG0000194_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre03.g148150 | |
| Cluster | HCCA: Cluster_69 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Vocar.0001s1048.1 | 32885665 | Root UVB sensitive family [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0019s0031.1 | 32892629 | Root UVB sensitive family [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | Enrichment |
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| MF | GO:0004521 | endoribonuclease activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Enrichment |
| MF | GO:0004672 | protein kinase activity | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0006020 | inositol metabolic process | IEP | Enrichment |
| BP | GO:0006066 | alcohol metabolic process | IEP | Enrichment |
| BP | GO:0006468 | protein phosphorylation | IEP | Enrichment |
| BP | GO:0006813 | potassium ion transport | IEP | Enrichment |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
| MF | GO:0008483 | transaminase activity | IEP | Enrichment |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Enrichment |
| BP | GO:0019310 | inositol catabolic process | IEP | Enrichment |
| BP | GO:0019751 | polyol metabolic process | IEP | Enrichment |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0044275 | cellular carbohydrate catabolic process | IEP | Enrichment |
| BP | GO:0044282 | small molecule catabolic process | IEP | Enrichment |
| BP | GO:0046164 | alcohol catabolic process | IEP | Enrichment |
| BP | GO:0046174 | polyol catabolic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0050113 | inositol oxygenase activity | IEP | Enrichment |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Enrichment |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006968 | RUS_fam | 523 | 756 |
| No external refs found! |