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  5. Cre03.g143887

Cre03.g143887 (30787653)


Aliases : 30787653

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.arginine-tRNA ligase


Gene families : OG_01_0000600 (OrthoFinder) Phylogenetic Tree(s): OG0000600_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g143887
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.7 tig00000711_g3368.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.08 OrthoFinder
Cz04g31040.t1 No alias DALR anticodon binding; Arginyl-tRNA synthetase,... 0.02 OrthoFinder
Cz04g31060.t1 No alias Arginyl tRNA synthetase N-terminal domain; Arginyl-tRNA... 0.11 OrthoFinder
EOD28167 No alias Arginine-tRNA ligase [Ensembl]. 0.04 OrthoFinder
EOD28352 No alias Arginine-tRNA ligase [Ensembl]. 0.02 OrthoFinder
PTI_00G03620.1 No alias Arginyl-tRNA synthetase, catalytic core domain; Arginyl... 0.03 OrthoFinder
Sro44_g026590.1 Contig358.g4828 Arginine--tRNA ligase 0.01 OrthoFinder
Sro589_g171830.1 Contig2898.g23120 Arginine--tRNA ligase 0.14 OrthoFinder
SymbC1.scaffold28049.1 28049.1 Carboxypeptidase regulatory-like domain [Interproscan]. 0.01 OrthoFinder
TP13G01500.1 No alias DALR anticodon binding; Arginyl-tRNA synthetase,... 0.01 OrthoFinder
Transcript_contig_53953 53953 Arginyl-tRNA synthetase, catalytic core domain; DALR... 0.05 OrthoFinder
lcl|BLLF01000592.1_cds_GFH13267.1_7744 HaLaN_09114, GFH13267 Putative arginine--tRNA ligase, cytoplasmic 0.04 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45481.1_1608 PRW45481 Arginine-tRNA chloroplastic mitochondrial-like isoform... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004814 arginine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006420 arginyl-tRNA aminoacylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR035684 ArgRS_core 121 466
IPR005148 Arg-tRNA-synth_N 13 100
IPR008909 DALR_anticod-bd 480 594
No external refs found!