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  5. Cre02.g143600

Cre02.g143600 (30785531)


Aliases : 30785531

Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component


Gene families : OG_01_0002402 (OrthoFinder) Phylogenetic Tree(s): OG0002402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g143600
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Cz10g01070.t1 No alias SAC3/GANP/THP3 [Interproscan]. 0.05 OrthoFinder
OT_01G03490.1 No alias SAC3/GANP/THP3 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR005062 SAC3/GANP/THP3_conserved 514 837
No external refs found!