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Aliases : 30785539, RBCS1
Description : Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo dimer.small subunit
Gene families : OG_01_0001359 (OrthoFinder) Phylogenetic Tree(s): OG0001359_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre02.g120100 | |
| Cluster | HCCA: Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz17g13100.t1 | No alias | Ribulose bisphosphate carboxylase small chain, domain... | 0.08 | OrthoFinder | |
| OT_18G01930.1 | No alias | Ribulose bisphosphate carboxylase small chain, domain... | 0.04 | OrthoFinder | |
| Sro51_chlor_g030110.1 | RbcS | RbcS | 0.01 | OrthoFinder | |
| Vocar.0033s0066.1 | 32886407 | Ribulose bisphosphate carboxylase small chain, domain... | 0.02 | OrthoFinder | |
| XM_002500716.1 | MICPUN_104787, 104787 | Ribulose bisphosphate carboxylase small chain 1,... | 0.06 | OrthoFinder | |
| XM_003064412.1 | MicpuC2_37122, 37122 | Ribulose bisphosphate carboxylase small chain, domain... | 0.06 | OrthoFinder | |
| XM_003064579.1 | MicpuC2_66674, 66674 | Ribulose bisphosphate carboxylase small chain, domain... | 0.06 | OrthoFinder | |
| lcl|BLLF01000015.1_cds_GFH05957.1_434 | HaLaN_00508, GFH05957 | Ribulose bisphosphate carboxylase small chain | 0.09 | OrthoFinder | |
| lcl|BLLF01001246.1_cds_GFH18086.1_12563 | HaLaN_14829, GFH18086 | Ribulose bisphosphate carboxylase small chain | 0.04 | OrthoFinder | |
| lcl|BLLF01001696.1_cds_GFH20785.1_15262 | HaLaN_17963, GFH20785 | Ribulose bisphosphate carboxylase small chain | 0.02 | OrthoFinder | |
| lcl|LHPG02000002.1_cds_PRW60779.1_4709 | PRW60779 | Ribulose bisphosphate small subunit precursor | 0.06 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004366 | glycerol-3-phosphate O-acyltransferase activity | IEP | Enrichment |
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | Enrichment |
| MF | GO:0004601 | peroxidase activity | IEP | Enrichment |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Enrichment |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Enrichment |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Enrichment |
| MF | GO:0005261 | cation channel activity | IEP | Enrichment |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0006979 | response to oxidative stress | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Enrichment |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Enrichment |
| MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
| MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Enrichment |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Enrichment |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
| BP | GO:0042440 | pigment metabolic process | IEP | Enrichment |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000894 | RuBisCO_ssu_dom | 57 | 171 |
| No external refs found! |