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  5. Cre02.g106600

Cre02.g106600 (30784812, RPS19)


Aliases : 30784812, RPS19

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS19 component


Gene families : OG_01_0003297 (OrthoFinder) Phylogenetic Tree(s): OG0003297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g106600
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021017.6 tig00021017_g17179.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.23 OrthoFinder
Cz11g12080.t1 No alias Ribosomal protein S19e [Interproscan]. 0.18 OrthoFinder
Dusal.1308s00001.1 33194138 Ribosomal protein S19e [Interproscan]. 0.06 OrthoFinder
EOD40848 No alias Ribosomal protein S19e [Interproscan]. 0.22 OrthoFinder
OT_11G02460.1 No alias Ribosomal protein S19e [Interproscan]. 0.24 OrthoFinder
PTI_13G03570.1 No alias Ribosomal protein S19e [Interproscan]. 0.48 OrthoFinder
Sro345_g122470.1 Contig2266.g18806 40S ribosomal protein S19 0.61 OrthoFinder
SymbC1.scaffold2373.2 2373.2 Ribosomal protein S19e [Interproscan]. 0.09 OrthoFinder
TP05G07890.1 No alias Ribosomal protein S19e [Interproscan]. 0.51 OrthoFinder
Vocar.0006s0096.1 32894126 Ribosomal protein S19e [Interproscan]. 0.04 OrthoFinder
XM_002509176.1 MICPUN_107171, 107171 Ribosomal protein S19e [Interproscan]. 0.47 OrthoFinder
XM_003061489.1 MicpuC2_49693, 49693 Ribosomal protein S19e [Interproscan]. 0.16 OrthoFinder
lcl|BLLF01000010.1_cds_GFH05838.1_315 HaLaN_00368, GFH05838 Ribosomal protein S19e [Interproscan]. 0.15 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59438.1_7304 PRW59438 40S ribosomal S19-1 0.01 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494467.1_2997 KAA8494467 40S ribosomal protein S19-1 0.17 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001266 Ribosomal_S19e 8 143
No external refs found!