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  5. Cre02.g104700

Cre02.g104700 (30786376)


Aliases : 30786376

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g104700
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278229 30778862 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder
Transcript_contig_57656 57656 SBP domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_57690 57690 SBP domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_59102 59102 SBP domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_80746 80746 SBP domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0653.1 32885344 SBP domain [Interproscan]. 0.06 OrthoFinder
Vocar.0042s0082.1 32892061 SBP domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR004333 SBP_dom 91 164
No external refs found!