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  5. Cre02.g102250

Cre02.g102250 (30785015, RPS3)


Aliases : 30785015, RPS3

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3 component


Gene families : OG_01_0003293 (OrthoFinder) Phylogenetic Tree(s): OG0003293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g102250
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021462.41 tig00021462_g21604.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.34 OrthoFinder
Cz02g33150.t1 No alias K Homology domain, type 2; Ribosomal protein S3,... 0.29 OrthoFinder
Dusal.0669s00001.1 33197930 Ribosomal protein S3, C-terminal; K Homology domain,... 0.07 OrthoFinder
EOD12304 No alias K Homology domain, type 2 [Interproscan]. 0.04 OrthoFinder
EOD31013 No alias Ribosomal protein S3, C-terminal; K Homology domain,... 0.15 OrthoFinder
OT_04G01280.1 No alias K Homology domain, type 2; Ribosomal protein S3,... 0.21 OrthoFinder
PTI_04G00160.1 No alias K Homology domain, type 2; Ribosomal protein S3,... 0.32 OrthoFinder
Sro694_g188530.1 Contig4437.g33306 40S ribosomal protein S3 0.38 OrthoFinder
TP04G07750.1 No alias K Homology domain, type 2; Ribosomal protein S3,... 0.27 OrthoFinder
Vocar.0002s0314.1 32891162 K Homology domain, type 2; Ribosomal protein S3,... 0.2 OrthoFinder
XM_002508158.1 MICPUN_91459, 91459 Ribosomal protein S3, C-terminal; K Homology domain,... 0.31 OrthoFinder
XM_003057639.1 MicpuC2_26239, 26239 K Homology domain, type 2; Ribosomal protein S3,... 0.1 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493723.1_4485 KAA8493723 40S ribosomal protein S3-A 0.19 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR001351 Ribosomal_S3_C 63 145
IPR004044 KH_dom_type_2 2 49
No external refs found!