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  5. Cre02.g101400

Cre02.g101400 (30785683, CHC1)


Aliases : 30785683, CHC1

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion.heavy chain


Gene families : OG_01_0002678 (OrthoFinder) Phylogenetic Tree(s): OG0002678_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g101400
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cz07g27260.t1 No alias Clathrin, heavy chain, propeller repeat; Clathrin, heavy... 0.02 OrthoFinder
OT_01G01810.1 No alias Clathrin, heavy chain/VPS, 7-fold repeat;... 0.02 OrthoFinder
lcl|BLLF01003272.1_cds_GFH26883.1_21360 HaLaN_25106, GFH26883 Clathrin heavy chain 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499470.1_8423 KAA8499470 Clathrin heavy chain 1 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496164.1_2162 KAA8496164 Clathrin heavy chain 1 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492928.1_2664 KAA8492928 Clathrin heavy chain 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR000547 Clathrin_H-chain/VPS_repeat 847 977
IPR000547 Clathrin_H-chain/VPS_repeat 990 1130
IPR000547 Clathrin_H-chain/VPS_repeat 698 834
IPR000547 Clathrin_H-chain/VPS_repeat 1437 1576
IPR000547 Clathrin_H-chain/VPS_repeat 1143 1278
IPR000547 Clathrin_H-chain/VPS_repeat 1288 1429
IPR000547 Clathrin_H-chain/VPS_repeat 553 689
IPR015348 Clathrin_H-chain_linker_core 341 364
IPR022365 Clathrin_H-chain_propeller_rpt 152 193
No external refs found!