1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre02.g100000

Cre02.g100000 (30785704)


Aliases : 30785704

Description : Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA2 component


Gene families : OG_01_0003292 (OrthoFinder) Phylogenetic Tree(s): OG0003292_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g100000
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020684.26 tig00020684_g12875.t1 Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.08 OrthoFinder
Cz03g08010.t1 No alias Replication protein A, C-terminal [Interproscan]. 0.02 OrthoFinder
Cz03g08020.t1 No alias OB-fold nucleic acid binding domain, AA-tRNA... 0.02 OrthoFinder
OT_13G01140.1 No alias Replication protein A, C-terminal; OB-fold nucleic acid... 0.06 OrthoFinder
PTI_02G05430.1 No alias Replication protein A, C-terminal [Interproscan]. 0.03 OrthoFinder
Sro461_g147680.1 Contig3552.g27422 Replication protein A 32 kDa subunit 0.1 OrthoFinder
TP05G04330.1 No alias OB-fold nucleic acid binding domain, AA-tRNA... 0.02 OrthoFinder
Vocar.0012s0105.1 32894898 OB-fold nucleic acid binding domain, AA-tRNA... 0.04 OrthoFinder
XM_002502895.1 MICPUN_101095, 101095 Replication protein A, C-terminal; OB-fold nucleic acid... 0.03 OrthoFinder
XM_003058768.1 MicpuC2_57959, 57959 OB-fold nucleic acid binding domain, AA-tRNA... 0.07 OrthoFinder
lcl|BLLF01000593.1_cds_GFH13280.1_7757 HaLaN_09130, GFH13280 Hypothetical protein 0.01 OrthoFinder
lcl|BLLF01000593.1_cds_GFH13281.1_7758 HaLaN_09131, GFH13281 RPA_C domain-containing protein 0.07 OrthoFinder
lcl|BLLF01001421.1_cds_GFH19192.1_13669 HaLaN_16100, GFH19192 RPA_C domain-containing protein 0.07 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56187.1_10019 PRW56187 Replication A 32 kDa subunit A-like 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492979.1_2715 KAA8492979 Replication protein A 32 kDa subunit 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
BP GO:0010824 regulation of centrosome duplication IEP Enrichment
BP GO:0010826 negative regulation of centrosome duplication IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032886 regulation of microtubule-based process IEP Enrichment
BP GO:0032954 regulation of cytokinetic process IEP Enrichment
BP GO:0032955 regulation of division septum assembly IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0036038 MKS complex IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
CC GO:0042555 MCM complex IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046605 regulation of centrosome cycle IEP Enrichment
BP GO:0046606 negative regulation of centrosome cycle IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051494 negative regulation of cytoskeleton organization IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901891 regulation of cell septum assembly IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 78 151
IPR014892 RPA_C 170 284
No external refs found!