1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre02.g086750

Cre02.g086750 (30786081)


Aliases : 30786081

No description available


Gene families : OG_01_0004371 (OrthoFinder) Phylogenetic Tree(s): OG0004371_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g086750
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020675.101 tig00020675_g12683.t1 No description available 0.04 OrthoFinder
Cz03g36140.t1 No alias Hypothetical protein 0.04 OrthoFinder
EOD33131 No alias RNA polymerase Rpb7-like , N-terminal [Interproscan]. 0.02 OrthoFinder
OT_14G01780.1 No alias RNA polymerase Rpb7-like , N-terminal [Interproscan]. 0.04 OrthoFinder
Vocar.0004s0440.1 32889547 RNA polymerase Rpb7-like , N-terminal; RPA43, OB domain... 0.03 OrthoFinder
XM_002505607.1 MICPUN_103668, 103668 RNA polymerase Rpb7-like , N-terminal [Interproscan]. 0.11 OrthoFinder
XM_003059924.1 MicpuC2_40447, 40447 RNA polymerase Rpb7-like , N-terminal [Interproscan]. 0.09 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45236.1_1796 PRW45236 DNA-directed RNA polymerase I subunit rpa43 isoform X1 0.17 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR005576 Rpb7-like_N 17 84
No external refs found!