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  5. Cre02.g083800

Cre02.g083800 (30785208)


Aliases : 30785208

Description : Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 OS=Arabidopsis thaliana


Gene families : OG_01_0000940 (OrthoFinder) Phylogenetic Tree(s): OG0000940_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre02.g083800
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021464.17 tig00021464_g21723.t1 Trifunctional UDP-glucose... 0.03 OrthoFinder
Cz04g38110.t1 No alias NAD-dependent epimerase/dehydratase [Interproscan]. 0.02 OrthoFinder
Cz04g38120.t1 No alias Hypothetical protein 0.02 OrthoFinder
Cz07g10180.t1 No alias NAD(P)-binding domain [Interproscan]. 0.05 OrthoFinder
Dusal.1480s00001.1 33187688 NAD(P)-binding domain [Interproscan]. 0.03 OrthoFinder
OT_19G00110.1 No alias NAD(P)-binding domain; NAD-dependent... 0.03 OrthoFinder
PTI_12G02950.1 No alias NAD(P)-binding domain [Interproscan]. 0.02 OrthoFinder
TP06G03760.1 No alias NAD(P)-binding domain [Interproscan]. 0.02 OrthoFinder
XM_003057274.1 MicpuC2_32377, 32377 NAD-dependent epimerase/dehydratase; NAD(P)-binding... 0.03 OrthoFinder
lcl|BLLF01003739.1_cds_GFH28095.1_22572 HaLaN_26525, GFH28095 NAD(P)-bd_dom domain-containing protein 0.04 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61216.1_94 PRW61216 GDP-L-fucose synthase 2 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56582.1_9692 PRW56582 GDP-L-fucose synthase 2 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 21 325
No external refs found!