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Aliases : 30788525
Description : Polyadenylate-binding protein-interacting protein 3 OS=Arabidopsis thaliana
Gene families : OG_01_0004365 (OrthoFinder) Phylogenetic Tree(s): OG0004365_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre01.g063997 | |
| Cluster | HCCA: Cluster_139 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000944.34 | tig00000944_g5957.t1 | No description available | 0.02 | OrthoFinder | |
| Cz09g10010.t1 | No alias | Ataxin-2, C-terminal; LsmAD domain; Ataxin 2, SM domain... | 0.03 | OrthoFinder | |
| Dusal.0634s00001.1 | 33202941 | LsmAD domain; Ataxin 2, SM domain [Interproscan]. | 0.05 | OrthoFinder | |
| Sro715_g191800.1 | Contig4130.g31592 | Binding protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000339 | RNA cap binding | IEP | Enrichment |
| MF | GO:0000340 | RNA 7-methylguanosine cap binding | IEP | Enrichment |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006464 | cellular protein modification process | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| MF | GO:0035596 | methylthiotransferase activity | IEP | Enrichment |
| BP | GO:0036211 | protein modification process | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| MF | GO:0050497 | alkylthioltransferase activity | IEP | Enrichment |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Enrichment |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| No external refs found! |