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  5. Cre01.g062172

Cre01.g062172 (30789439, HBV1)


Aliases : 30789439, HBV1

Description : Chromatin organisation.histones.H2B-type histone


Gene families : OG_01_0000102 (OrthoFinder) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g062172
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264800 30779004 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder
Cre06.g266750 30778405 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder
Cre06.g273850 30778673, HTB7 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder
Cre06.g275800 30778604 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder
Cz02g02060.t1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
EOD16252 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
EOD17479 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
EOD18484 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
EOD26824 No alias Putative histone H2B [Ensembl]. 0.01 OrthoFinder
EOD34128 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
EOD41189 No alias Putative histone H2B [Ensembl]. 0.01 OrthoFinder
PTI_06G02120.1 No alias Histone H2A/H2B/H3 [Interproscan]. 0.01 OrthoFinder
Sro1535_g280540.1 Contig3021.g24091 Histone H2B 0.02 OrthoFinder
Sro228_g092710.1 Contig1235.g11585 Histone H2B 0.01 OrthoFinder
Sro470_g149440.1 Contig850.g9338 Histone H2B 0.01 OrthoFinder
Vocar.0001s0460.1 32886156 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
Vocar.0005s0053.1 32884040 Histone H2A/H2B/H3 [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498015.1_6968 KAA8498015 Histone H2B type 1-M 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 13 97
No external refs found!