Cre01.g053850 (30788730)


Aliases : 30788730

Description : WD repeat-containing protein RUP1 OS=Arabidopsis thaliana


Gene families : OG_01_0001635 (OrthoFinder) Phylogenetic Tree(s): OG0001635_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g053850
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cz05g04250.t1 No alias WD40 repeat [Interproscan]. 0.11 OrthoFinder
Cz09g04220.t1 No alias Hypothetical protein 0.07 OrthoFinder
Cz10g05130.t1 No alias WD40 repeat; Zinc finger, C3HC4 type (RING finger)... 0.04 OrthoFinder
OT_10G03400.1 No alias Signal transduction response regulator, receiver domain;... 0.11 OrthoFinder
Vocar.0001s0511.1 32884842 WD40 repeat [Interproscan]. 0.12 OrthoFinder
Vocar.0028s0192.1 32895671 WD40 repeat; Zinc finger, C3HC4 type (RING finger)... 0.1 OrthoFinder
Vocar.0037s0090.1 32897640 WD40 repeat; Signal transduction response regulator,... 0.06 OrthoFinder
XM_002503783.1 MICPUN_59822, 59822 Response regulator receiver/WD40 domain fusion protein 0.05 OrthoFinder
XM_003055076.1 MicpuC2_50551, 50551 Response regulator receiver/WD40 domain fusion protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 396 427
IPR001680 WD40_repeat 559 594
No external refs found!