1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre01.g052100

Cre01.g052100 (30788991, PRPL18)


Aliases : 30788991, PRPL18

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL18 component


Gene families : OG_01_0004009 (OrthoFinder) Phylogenetic Tree(s): OG0004009_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g052100
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cz09g08170.t1 No alias Ribosomal protein L18 [Interproscan]. 0.25 OrthoFinder
Dusal.0423s00013.1 33192022 Ribosomal protein L18 [Interproscan]. 0.03 OrthoFinder
EOD04622 No alias Ribosomal protein L18 [Interproscan]. 0.03 OrthoFinder
EOD29973 No alias Ribosomal protein L18 [Interproscan]. 0.02 OrthoFinder
OT_07G04560.1 No alias Ribosomal protein L18 [Interproscan]. 0.21 OrthoFinder
Sro51_chlor_g029630.1 Rpl18 Rpl18 0.08 OrthoFinder
SymbC1.scaffold436.6 436.6 Ribosomal protein L18 [Interproscan]. 0.04 OrthoFinder
TPCG02610.1 No alias Ribosomal protein L18 [Interproscan]. 0.09 OrthoFinder
Transcript_contig_59895 59895 Ribosomal protein L18 [Interproscan]. 0.03 OrthoFinder
Vocar.0001s0412.1 32884219 Ribosomal protein L18 [Interproscan]. 0.21 OrthoFinder
XM_002503130.1 MICPUN_59217, 59217 Ribosomal protein L18 (RPL18.1) 0.19 OrthoFinder
XM_003061146.1 MicpuC2_28274, 28274 Ribosomal protein L18 [Interproscan]. 0.08 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56666.1_9892 PRW56666 50S ribosomal L18 0.13 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497983.1_6936 KAA8497983 50S ribosomal protein L18 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 29 145
No external refs found!