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  5. Cre01.g043000

Cre01.g043000 (30789590)


Aliases : 30789590

No description available


Gene families : OG_01_0000198 (OrthoFinder) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g043000
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000113.127 tig00000113_g5708.t1 No description available 0.04 OrthoFinder
Cz04g21170.t1 No alias 4Fe-4S single cluster domain; Radical SAM [Interproscan]. 0.03 OrthoFinder
OT_01G01400.1 No alias Radical SAM [Interproscan]. 0.04 OrthoFinder
PTI_08G00750.1 No alias Radical SAM [Interproscan]. 0.03 OrthoFinder
Sro1121_g243450.1 Contig138.g1538 RNA methyltransferase RlmN 0.01 OrthoFinder
Sro414_g138300.1 Contig453.g6105 Probable dual-specificity RNA methyltransferase RlmN 0.04 OrthoFinder
TP01G07900.1 No alias Hypothetical protein 0.02 OrthoFinder
XM_002503982.1 MICPUN_60237, 60237 Radical SAM [Interproscan]. 0.03 OrthoFinder
XM_002504959.1 MICPUN_86756, 86756 Radical SAM [Interproscan]. 0.05 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496335.1_64 KAA8496335 Dual-specificity RNA methyltransferase RlmN 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR007197 rSAM 548 705
No external refs found!