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  5. Cre01.g042900

Cre01.g042900 (30789042)


Aliases : 30789042

Description : RNA processing.RNA modification.rRNA/tRNA methylation.DIM1A-type rRNA adenosine dimethylase


Gene families : OG_01_0000842 (OrthoFinder) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre01.g042900
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cz09g02220.t1 No alias Ribosomal RNA adenine methyltransferase KsgA/Erm [Interproscan]. 0.04 OrthoFinder
Dusal.1110s00002.1 33202836 Ribosomal RNA adenine methyltransferase KsgA/Erm [Interproscan]. 0.02 OrthoFinder
EOD14862 No alias Ribosomal RNA adenine methyltransferase KsgA/Erm [Interproscan]. 0.02 OrthoFinder
OT_08G02940.1 No alias Ribosomal RNA adenine methyltransferase KsgA/Erm [Interproscan]. 0.03 OrthoFinder
PTI_17G02720.1 No alias Ribosomal RNA adenine methyltransferase KsgA/Erm [Interproscan]. 0.04 OrthoFinder
Sro2218_g319550.1 Contig3225.g25511 Probable dimethyladenosine transferase 0.08 OrthoFinder
TP05G03850.1 No alias Ribosomal RNA adenine methyltransferase KsgA/Erm [Interproscan]. 0.12 OrthoFinder
XM_002508272.1 MICPUN_84159, 84159 Ribosomal RNA adenine methyltransferase KsgA/Erm [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44303.1_2409 PRW44303 Dimethyladenosine transferase 0.08 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494275.1_4139 KAA8494275 Ribosomal RNA small subunit methyltransferase A 0.02 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493494.1_4256 KAA8493494 Putative dimethyladenosine transferase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
MF GO:0008252 nucleotidase activity IEP Enrichment
MF GO:0008253 5'-nucleotidase activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
InterPro domains Description Start Stop
IPR001737 KsgA/Erm 40 263
No external refs found!