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  5. Cre01.g040350

Cre01.g040350 (30789422)


Aliases : 30789422

No description available


Gene families : OG_01_0000989 (OrthoFinder) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g040350
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cz01g44150.t1 No alias DNA mismatch repair protein MutS, C-terminal [Interproscan]. 0.03 OrthoFinder
PTI_14G02910.1 No alias DNA mismatch repair protein MutS, C-terminal; Smr domain... 0.02 OrthoFinder
Sro54_g031760.1 Contig2430.g19864 Endonuclease MutS2 (Fragment) 0.02 OrthoFinder
Sro54_g031760.2 No alias Smr domain [Interproscan]. 0.03 OrthoFinder
Vocar.0001s0995.1 32885273 DNA mismatch repair protein MutS, C-terminal [Interproscan]. 0.03 OrthoFinder
XM_003057240.1 MicpuC2_46707, 46707 DNA mismatch repair protein MutS, C-terminal [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005542 folic acid binding IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0072341 modified amino acid binding IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR000432 DNA_mismatch_repair_MutS_C 454 638
No external refs found!