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  5. Cre01.g038050

Cre01.g038050 (30788425)


Aliases : 30788425

No description available


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g038050

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.13 tig00000158_g10126.t1 External stimuli response.light.red/far red light.PHY... 0.02 OrthoFinder
Cpa|evm.model.tig00001215.7 tig00001215_g7570.t1 Histidine kinase 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre02.g074150 30785488, COP5 Histidine kinase 5 OS=Arabidopsis thaliana 0.05 OrthoFinder
Cre17.g733150 30781867 Histidine kinase 3 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cz12g05190.t1 No alias Archaeal/bacterial/fungal rhodopsins; Sterile alpha... 0.02 OrthoFinder
Dusal.0198s00010.1 33192678 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Dusal.0212s00008.1 33202594 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Dusal.0365s00004.1 33194892 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
Sro168_g074900.1 Contig1642.g14821 Sensor kinase/phosphatase LuxQ 0.01 OrthoFinder
Sro20_g014160.1 Contig2954.g23446 Peroxide stress-activated histidine kinase mak2 0.01 OrthoFinder
Sro28_g018500.1 Contig404.g5459 Sensor protein kinase WalK (Fragment) 0.03 OrthoFinder
Vocar.0018s0081.1 32898547 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
Vocar.0069s0008.1 32896762 Histidine kinase/HSP90-like ATPase; Signal transduction... 0.04 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12981.1_7458 HaLaN_08775, GFH12981 Signal transduction histidine kinase,... 0.03 OrthoFinder
lcl|BLLF01000788.1_cds_GFH14961.1_9438 HaLaN_11105, GFH14961 Signal transduction histidine kinase,... 0.03 OrthoFinder
lcl|BLLF01001142.1_cds_GFH17401.1_11878 HaLaN_14031, GFH17401 Signal transduction response regulator, receiver domain;... 0.01 OrthoFinder
lcl|BLLF01001346.1_cds_GFH18735.1_13212 HaLaN_15586, GFH18735 Signal transduction histidine kinase,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 336 395
IPR001789 Sig_transdc_resp-reg_receiver 1147 1239
IPR001425 Arc/bac/fun_rhodopsins 148 303
No external refs found!