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  5. Cre01.g036050

Cre01.g036050 (30789431, MLH1)


Aliases : 30789431, MLH1

Description : DNA damage response.DNA repair mechanisms.mismatch repair (MMR).MLH1-PMS1 heterodimer.MLH1 component


Gene families : OG_01_0000591 (OrthoFinder) Phylogenetic Tree(s): OG0000591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g036050
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000057.93 tig00000057_g112.t1 DNA mismatch repair protein PMS1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz09g18150.t1 No alias DNA mismatch repair protein, S5 domain 2-like;... 0.02 OrthoFinder
OT_06G04020.1 No alias MutL, C-terminal, dimerisation; DNA mismatch repair... 0.04 OrthoFinder
PTI_05G03450.1 No alias DNA mismatch repair protein, S5 domain 2-like;... 0.02 OrthoFinder
Sro2629_g333080.1 Contig3211.g25384 Protein MutL 0.02 OrthoFinder
Vocar.0001s1761.1 32884255 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;... 0.04 OrthoFinder
XM_002503161.1 MICPUN_96433, 96433 DNA mismatch repair and recombination (MLH1) 0.02 OrthoFinder
XM_003061181.1 MicpuC2_44648, 44648 DNA mismatch repair and recombination (Mlh1) 0.02 OrthoFinder
XM_003061945.1 MicpuC2_4434, 4434 DNA mismatch repair protein, MLH2/PMS1/Pms2 family (Pms1) 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004376 glycolipid mannosyltransferase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0051751 alpha-1,4-mannosyltransferase activity IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013507 DNA_mismatch_S5_2-like 250 379
IPR032189 Mlh1_C 675 1007
No external refs found!