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  5. Cre01.g034000

Cre01.g034000 (30789060, IPB1)


Aliases : 30789060, IPB1

Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB1 import karyopherin


Gene families : OG_01_0002947 (OrthoFinder) Phylogenetic Tree(s): OG0002947_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g034000
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cz02g27180.t1 No alias HEAT-like repeat; Importin-beta, N-terminal domain... 0.08 OrthoFinder
Dusal.0341s00012.1 33193250 Importin-beta, N-terminal domain; HEAT-like repeat... 0.04 OrthoFinder
EOD13968 No alias Importin-beta, N-terminal domain; HEAT-like repeat... 0.01 OrthoFinder
EOD32153 No alias Importin-beta, N-terminal domain; HEAT-like repeat... 0.01 OrthoFinder
OT_02G03840.1 No alias HEAT-like repeat [Interproscan]. 0.04 OrthoFinder
PTI_19G02980.1 No alias Importin-beta, N-terminal domain [Interproscan]. 0.03 OrthoFinder
Sro1968_g308410.1 Contig2992.g23785 Importin subunit beta-1 0.03 OrthoFinder
Transcript_contig_55044 55044 HEAT-like repeat; Importin-beta, N-terminal domain... 0.05 OrthoFinder
Vocar.0001s0767.1 32884512 Importin-beta, N-terminal domain; HEAT-like repeat... 0.04 OrthoFinder
XM_002503144.1 MICPUN_82956, 82956 HEAT-like repeat; Importin-beta, N-terminal domain... 0.07 OrthoFinder
XM_003061162.1 MicpuC2_45761, 45761 Importin-beta, N-terminal domain; HEAT-like repeat... 0.05 OrthoFinder
lcl|BLLF01000083.1_cds_GFH07239.1_1716 HaLaN_02016, GFH07239 Importin N-terminal domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44609.1_2368 PRW44609 Importin subunit beta-1-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 25 103
No external refs found!