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  5. Cre01.g030800

Cre01.g030800 (30788375, CSN2)


Aliases : 30788375, CSN2

Description : Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN2 component


Gene families : OG_01_0002381 (OrthoFinder) Phylogenetic Tree(s): OG0002381_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g030800
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021435.13 tig00021435_g21391.t1 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.06 OrthoFinder
Cpa|evm.model.tig00021435.14 tig00021435_g21391.t1 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 OrthoFinder
Cz04g25230.t1 No alias Proteasome component (PCI) domain [Interproscan]. 0.05 OrthoFinder
Dusal.1636s00001.1 33201495 Hypothetical protein 0.07 OrthoFinder
Dusal.2946s00001.1 33197969 Proteasome component (PCI) domain [Interproscan]. 0.03 OrthoFinder
Sro80_g043220.1 Contig92.g1066 Signalosome complex subunit 2 0.04 OrthoFinder
XM_002507479.1 MICPUN_51338, 51338 COP9 signalosome complex subunit 2 (CSN2) 0.02 OrthoFinder
lcl|BLLF01001666.1_cds_GFH20609.1_15086 HaLaN_17759, GFH20609 PCI domain-containing protein 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499262.1_8215 KAA8499262 COP9 signalosome complex subunit 2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0019107 myristoyltransferase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019781 NEDD8 activating enzyme activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000717 PCI_dom 305 407
No external refs found!