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  5. Cre01.g028450

Cre01.g028450 (30788447)


Aliases : 30788447

No description available


Gene families : OG_01_0000198 (OrthoFinder) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g028450
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000113.127 tig00000113_g5708.t1 No description available 0.02 OrthoFinder
Cz06g22280.t1 No alias Radical SAM [Interproscan]. 0.02 OrthoFinder
Cz07g17270.t1 No alias Radical SAM [Interproscan]. 0.03 OrthoFinder
OT_01G01400.1 No alias Radical SAM [Interproscan]. 0.1 OrthoFinder
OT_03G05110.1 No alias Radical SAM [Interproscan]. 0.09 OrthoFinder
OT_05G03630.1 No alias Radical SAM [Interproscan]. 0.02 OrthoFinder
OT_12G02200.1 No alias 4Fe-4S single cluster domain; Radical SAM [Interproscan]. 0.04 OrthoFinder
Sro355_g125110.1 Contig2977.g23669 RNA methyltransferase RlmN 0.03 OrthoFinder
XM_002503982.1 MICPUN_60237, 60237 Radical SAM [Interproscan]. 0.02 OrthoFinder
XM_002504959.1 MICPUN_86756, 86756 Radical SAM [Interproscan]. 0.1 OrthoFinder
XM_003054875.1 MicpuC2_10773, 10773 Hypothetical protein 0.06 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33242.1_3456 PRW33242 Ribosomal RNA large subunit methyltransferase N isoform A 0.04 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496335.1_64 KAA8496335 Dual-specificity RNA methyltransferase RlmN 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
InterPro domains Description Start Stop
IPR007197 rSAM 208 367
No external refs found!