Cre01.g028200 (30789461)

Aliases : 30789461

Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).DDX5 pre-mRNA splicing regulator

Gene families : OG_01_0000110 (OrthoFinder) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre01.g028200
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cz06g13010.t1	No alias	Helicase, C-terminal; DEAD/DEAH box helicase domain...	0.02	OrthoFinder
Dusal.0313s00016.1	33202806	Helicase, C-terminal; WW domain; DEAD/DEAH box helicase...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	78	248
IPR001650	Helicase_C	285	363
IPR001650	Helicase_C	636	665

External Links

No external refs found!

Cre01.g028200 (30789461)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation