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  5. Cre01.g022250

Cre01.g022250 (30789331, MRPL3)


Aliases : 30789331, MRPL3

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL3 component


Gene families : OG_01_0000938 (OrthoFinder) Phylogenetic Tree(s): OG0000938_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g022250
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001574.9 tig00001574_g9355.t1 50S ribosomal protein L3-2, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre48.g761197 30778371 Protein biosynthesis.organelle translation... 0.06 OrthoFinder
Cz04g11050.t1 No alias Hypothetical protein 0.04 OrthoFinder
Cz04g11060.t1 No alias Ribosomal protein L3 [Interproscan]. 0.04 OrthoFinder
Dusal.0108s00003.1 33189525 Ribosomal protein L3 [Interproscan]. 0.02 OrthoFinder
Dusal.0638s00007.1 33201545 Ribosomal protein L3 [Interproscan]. 0.02 OrthoFinder
OT_02G04320.1 No alias Ribosomal protein L3 [Interproscan]. 0.07 OrthoFinder
OT_20G00300.1 No alias Ribosomal protein L3 [Interproscan]. 0.04 OrthoFinder
Sro261_g101740.1 Contig3068.g24446 Protein L3 0.04 OrthoFinder
Sro51_chlor_g029470.1 Rpl3 Rpl3 0.05 OrthoFinder
TPCG02330.1 No alias Ribosomal protein L3 [Interproscan]. 0.03 OrthoFinder
XM_002504954.1 MICPUN_62670, 62670 Ribosomal protein L3, chloroplast precursor (RPL3) 0.07 OrthoFinder
XM_003060563.1 MicpuC2_44548, 44548 Ribosomal protein L3 [Interproscan]. 0.06 OrthoFinder
XM_003062879.1 MicpuC2_6446, 6446 Ribosomal protein L3 [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494995.1_3525 KAA8494995 50S ribosomal protein L3 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000597 Ribosomal_L3 233 320
No external refs found!