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  5. Cre01.g004350

Cre01.g004350 (30788641)


Aliases : 30788641

Description : Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.BRO1 deubiquitinase recruiting protein


Gene families : OG_01_0002372 (OrthoFinder) Phylogenetic Tree(s): OG0002372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g004350
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020610.15 tig00020610_g11953.t1 Vacuolar-sorting protein BRO1 OS=Arabidopsis thaliana 0.03 OrthoFinder
OT_12G00980.1 No alias BRO1 domain; ALIX V-shaped domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_474 474 BRO1 domain [Interproscan]. 0.02 OrthoFinder
Vocar.0013s0045.1 32896207 ALIX V-shaped domain; BRO1 domain [Interproscan]. 0.02 OrthoFinder
XM_002503924.1 MICPUN_105844, 105844 BRO1 domain; ALIX V-shaped domain [Interproscan]. 0.02 OrthoFinder
XM_003055463.1 MicpuC2_24224, 24224 BRO1 domain; ALIX V-shaped domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000024.1_cds_GFH06156.1_633 HaLaN_00737, GFH06156 BRO1 domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56819.1_9414 PRW56819 ALG-2 interacting X 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
InterPro domains Description Start Stop
IPR025304 ALIX_V_dom 421 706
IPR004328 BRO1_dom 8 383
No external refs found!