1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000339.25

Cpa|evm.model.tig00000339.25 (tig00000339_g24187.t1)


Aliases : tig00000339_g24187.t1

Description : Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana


Gene families : OG_01_0000285 (OrthoFinder) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000339.25
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020912.86 tig00000489_g1357.t1 Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana 0.05 OrthoFinder
TP13G01520.1 No alias SNF2-related, N-terminal domain; Helicase, C-terminal;... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 332 444
IPR000330 SNF2_N 95 162
No external refs found!