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  5. Cpa|evm.model.tig00000319.12

Cpa|evm.model.tig00000319.12 (tig00000319_g24123.t1)


Aliases : tig00000319_g24123.t1

No description available


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000319.12
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001094.33 tig00001094_g7005.t1 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder
Cz09g32220.t1 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
Cz16g11080.t1 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold510.4 510.4 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_002503861.1 MICPUN_50956, 50956 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_003054990.1 MicpuC2_50363, 50363 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496988.1_717 KAA8496988 E3 ubiquitin-protein ligase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 150 178
No external refs found!