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  5. Cpa|evm.model.tig00000317.33

Cpa|evm.model.tig00000317.33 (tig00000317_g24044.t1)


Aliases : tig00000317_g24044.t1

No description available


Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000317.33
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000025.39 tig00000025_g7945.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00001443.3 tig00001443_g8748.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020556.28 tig00020556_g10996.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020911.62 tig00020911_g15766.t1 No description available 0.04 OrthoFinder
Cre02.g142166 30786493 No description available 0.02 OrthoFinder
Cre10.g427850 30790464 No description available 0.02 OrthoFinder
Cre10.g457400 30790407 No description available 0.03 OrthoFinder
Cre13.g586700 30784046 No description available 0.03 OrthoFinder
Cre17.g698903 30781618 No description available 0.04 OrthoFinder
Cz04g22190.t1 No alias Hypothetical protein 0.02 OrthoFinder
Dusal.0439s00005.1 33199605 PAS domain [Interproscan]. 0.02 OrthoFinder
Dusal.0564s00003.1 33195688 Hypothetical protein 0.02 OrthoFinder
Vocar.0004s0312.1 32889633 PAS fold [Interproscan]. 0.02 OrthoFinder
Vocar.0012s0063.1 32895032 PAS domain [Interproscan]. 0.02 OrthoFinder
Vocar.0021s0101.1 32895906 PAS domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000958.1_cds_GFH16182.1_10659 HaLaN_12556, GFH16182 PAS domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000014 PAS 103 200
IPR000014 PAS 4 76
No external refs found!