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  5. Cpa|evm.model.tig00000310.59

Cpa|evm.model.tig00000310.59 (tig00000310_g23984.t1)


Aliases : tig00000310_g23984.t1

Description : Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor


Gene families : OG_01_0000919 (OrthoFinder) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000310.59
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
Cre10.g435500 30790031, EFT2 Protein biosynthesis.organelle translation... 0.04 OrthoFinder
Cz02g30200.t1 No alias S1 domain [Interproscan]. 0.01 OrthoFinder
Cz06g36160.t1 No alias Translation elongation factor EFTs/EF1B, dimerisation... 0.02 OrthoFinder
OT_04G00100.1 No alias S1 domain; Translation elongation factor EFTs/EF1B,... 0.02 OrthoFinder
Sro135_g063790.1 Contig2231.g18524 Factor Ts 0.01 OrthoFinder
TP02G08520.1 No alias Translation elongation factor EFTs/EF1B, dimerisation... 0.02 OrthoFinder
Vocar.0006s0257.1 32894156 Translation elongation factor EFTs/EF1B, dimerisation;... 0.01 OrthoFinder
XM_002499787.1 MICPUN_55643, 55643 S1 domain; Translation elongation factor EFTs/EF1B,... 0.04 OrthoFinder
lcl|BLLF01000034.1_cds_GFH06339.1_816 HaLaN_00952, GFH06339 Elongation factor Ts 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58941.1_7328 PRW58941 Elongation factor Ts 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495585.1_1583 KAA8495585 Elongation factor Ts 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR014039 Transl_elong_EFTs/EF1B_dimer 107 330
No external refs found!