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Aliases : tig00000254_g22505.t1
Description : E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana
Gene families : OG_01_0000849 (OrthoFinder) Phylogenetic Tree(s): OG0000849_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000254.52 | |
| Cluster | HCCA: Cluster_183 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD36423 | No alias | HECT domain [Interproscan]. | 0.01 | OrthoFinder | |
| OT_13G02670.1 | No alias | HECT domain [Interproscan]. | 0.01 | OrthoFinder | |
| XM_003060212.1 | MicpuC2_70217, 70217 | Ubiquitin-protein ligase (UPL) | 0.01 | OrthoFinder | |
| lcl|LHPG02000012.1_cds_PRW45057.1_1639 | PRW45057 | E3 ubiquitin-ligase UPL6 | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0003774 | motor activity | IEP | Enrichment |
| MF | GO:0003777 | microtubule motor activity | IEP | Enrichment |
| MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Enrichment |
| MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Enrichment |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Enrichment |
| BP | GO:0007017 | microtubule-based process | IEP | Enrichment |
| BP | GO:0007018 | microtubule-based movement | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Enrichment |
| MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
| CC | GO:0019866 | organelle inner membrane | IEP | Enrichment |
| CC | GO:0031966 | mitochondrial membrane | IEP | Enrichment |
| MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000569 | HECT_dom | 561 | 870 |
| No external refs found! |