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Aliases : tig00000254_g22499.t1
Description : Coenzyme metabolism.pyridoxalphosphate synthesis.pyridoxal 5-phosphate synthase complex.synthase component
Gene families : OG_01_0002309 (OrthoFinder) Phylogenetic Tree(s): OG0002309_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000254.47 | |
| Cluster | HCCA: Cluster_106 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz01g23220.t1 | No alias | PdxS/SNZ N-terminal domain [Interproscan]. | 0.04 | OrthoFinder | |
| OT_03G00220.1 | No alias | PdxS/SNZ N-terminal domain [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_19G01670.1 | No alias | PdxS/SNZ N-terminal domain [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0006s0089.1 | 32893873 | PdxS/SNZ N-terminal domain [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | Enrichment |
| MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| MF | GO:0004521 | endoribonuclease activity | IEP | Enrichment |
| MF | GO:0004525 | ribonuclease III activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| BP | GO:0006996 | organelle organization | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| BP | GO:0009314 | response to radiation | IEP | Enrichment |
| BP | GO:0009416 | response to light stimulus | IEP | Enrichment |
| BP | GO:0009581 | detection of external stimulus | IEP | Enrichment |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Enrichment |
| BP | GO:0009583 | detection of light stimulus | IEP | Enrichment |
| BP | GO:0009584 | detection of visible light | IEP | Enrichment |
| BP | GO:0009605 | response to external stimulus | IEP | Enrichment |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Enrichment |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Enrichment |
| BP | GO:0018298 | protein-chromophore linkage | IEP | Enrichment |
| BP | GO:0032200 | telomere organization | IEP | Enrichment |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Enrichment |
| BP | GO:0042592 | homeostatic process | IEP | Enrichment |
| BP | GO:0051276 | chromosome organization | IEP | Enrichment |
| BP | GO:0051606 | detection of stimulus | IEP | Enrichment |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Enrichment |
| BP | GO:0065008 | regulation of biological quality | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033755 | PdxS/SNZ_N | 14 | 219 |
| No external refs found! |