Cpa|evm.model.tig00000042.59 (tig00000254_g22474.t1)


Aliases : tig00000254_g22474.t1

Description : Ethylene receptor 1 OS=Brassica oleracea


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000042.59
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.04 OrthoFinder
Cpa|evm.model.tig00000093.235 tig00000093_g3661.t1 Histidine kinase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00000158.93 tig00000158_g10200.t1 Probable histidine kinase 5 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder
Cpa|evm.model.tig00000190.40 tig00000190_g13861.t1 Ethylene receptor OS=Nicotiana tabacum 0.05 OrthoFinder
Cpa|evm.model.tig00000254.26 tig00000254_g22474.t1 Ethylene receptor 1 OS=Brassica oleracea 0.04 OrthoFinder
Cpa|evm.model.tig00000605.24 tig00000605_g2490.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00020553.260 tig00020553_g10746.t1 Probable histidine kinase 6 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cpa|evm.model.tig00020941.45 tig00020941_g16237.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.03 OrthoFinder
Cpa|evm.model.tig00021348.102 tig00021348_g20609.t1 No description available 0.04 OrthoFinder
Cz12g05190.t1 No alias Archaeal/bacterial/fungal rhodopsins; Sterile alpha... 0.01 OrthoFinder
Vocar.0069s0008.1 32896762 Histidine kinase/HSP90-like ATPase; Signal transduction... 0.02 OrthoFinder
XM_002509139.1 MICPUN_52624, 52624 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 888 995
IPR003018 GAF 582 742
IPR003018 GAF 384 535
IPR003661 HisK_dim/P 775 838
IPR001789 Sig_transdc_resp-reg_receiver 1180 1298
No external refs found!